Guide RNA/mRNA alignment for T. brucei Cytochrome b (Cyb)
1 GUUAAGAAUA AUGGUUAUAA AUUUUAUAUA AAuAuGuuuC GuuGuAGAuu
||X||:| X::X||||XX
UAAAAGA AGGGAUCUCU
51 uuuAuuAuuu uuuuuAuuAu uuAGAAAuuu GuGuuGUCUU UUAAUGUCAG
|X||||||: ::|||||:|: :||:|||||: :::||||||| |||||X||XX
AUUAAUAAG GGAAAUAGUG GAUUUUUAAG UGUAACAGAA AAUUAGAGGG
gCyb[558]
:|X|||||:: |::::||||: |:||||||:| :::||||||| |||X|:||XX
CAUCAAUAGG AGGGGUAAUG AGUCUUUAGA UGUAACAGAA AAUGAUAGAG
101 GUUGUUUAUA UAGAAUAUAU GGGGUAGGUU UUAGUUUAGG AUUUUUUAUA
X
G gCyb[560A]
151 GCAUUGCAAA UAAUUUGUGG AGUGUGUUUA GCUUGAUUAU UUUUUAGUUG
201 UUUUAUUUGU UCAAAUUGAU AUUUUGUAUU AUUUUUAUGA GAUUUUGAUU
251 UGGGUUUUGU GAUAAGAAGU GUACAUAUAU GUUUUACAUC UUUAUUAUAU
301 UUACUAUUAU AUAUCCAUAU AUUUAAGUCA AUAACGUUAA UAAUAUUGUU
351 UGACACACAU AUAUUAGUAU GAUUUAUAGG UUUUAUAUUG UUUGUAUUUA
401 UAAUAAUAAU AGCUUUUAUA GGAUAUGUAC UGCCUUGUAC AAUGAUGUCA
451 UACUGAGGUU UAACGGUGUU UAGUAAUAUU AUAGCAACAG UACCAAUUUU
501 AGGUAUAUGA UUAUGUUAUU GAAUUUGGGG AAGUGAAUUU AUAAACGAUU
551 UUACAUUAUU AAAGUUACAU GUAUUACAUG UGUUAUUACC AUUUAUAUUA
601 CUAAUAAUAU UAAUUUUACA UUUAUUUUGU CUACAUUAUU UUAUGAGUUC
651 UGAUGCAUUU UGUGAUAGGU UUGCAUUUUA UUGUGAAAGA UUAAGUUUUU
701 GUAUGUGGUU UUAUUUGAGA GAUAUGUUUU UAGCAUUUUC AAUAUUAUUA
751 UGUAUGAUGU AUGUUAUAUU UAUAAAUUGG UAUUUUGUAU UUCAUGAGGA
801 AUCUUGAGUU AUAGUAGAUA CACUAAAAAC AUCAGAUAAA AUAUUACCAG
851 AAUGAUUUUU UUUGUAUUUA UUCGGUUUUU UAAAGGCAAU CCCAGAUAAG
901 UUUAUGGGUU UGUUUUUAAU GGUUAUUUUA UUAUUCUCAU UAUUUUUAUU
951 UAUAUUGAAU UGUAUAUUAU GAUUUGUGUA UUGUAGAAGU UCAUUAUUAU
1001 GAUUAACAUA UUCGUUAAUA UUAUUUUAUA GUAUAUGAAU GAGUGGUUUU
1051 UUAGCAUUAU AUGUAGUAUU AGCAUAUCCA AUAUGAAUGG AAUUACAAUA
1101 CUGAGUAUUA UUAUUAUUUU UGUUGAUAGU GUGUAGGUUA GAUUAGUUUA
1151