Gene: NADH dehydrogenase 8 (ND8,G1,CR1)
species: Trypanosoma brucei
Edited/unedited: edited
Notes:


 
       1 ---------+---------+---------+--------  -       +       -     41
DNA      TTAGAATCAATTTAATAATTTTAAGTTTTGGTTGATTA  A       A       A   
RNA-ed   UUAGAAUCAAUUUAAUAAUUUUAAGUUUUGGUUGAUUAuuAuuuuuuuAuuuuuuuAuuu
       1 ---------+---------+---------+---------+---------+---------+  60
AA  

      42   - - -         --      -       --+---   -     - - - --   +   60
           G A G         GA      G       TTTTTG   G     A A G GT   G 
         uuGuAuGuuuuuuuuuGAuuuuuuGuuuuuuuUUUUUGuuuGuuuuuAuAuGuGUuuuGu
      61 ---------+---------+---------+---------+---------+---------+  120
             M  F  F  F  D  F  L  F  F  F  F  V  C  F  Y  M  C  F  V  
       1     -  -  -  -  -  -  -  -  -  +  -  -  -  -  -  -  -  -  -    19


      61   -  - -  ------ +-----   ----+---  ---  ---+-  -  --   -  --  -- +-  101
           G  G G  ATTTTC ATTTTG   ATTTCCCA  GAG  AACCA  G  AG   A  GG  CG GG
         uuGuuGuGuuA    CuA UUUGuuuA   CCCAuuGAGuuAACCAuuGuuAGuuuAuuGGuuCGuGG
     121 ---------+-    --- -----+--   -------+---------+---------+---------+  180
          C  C  V  T      I   C  L     P  I  E  L  T  I  V  S  L  L  V  R  G  
      20  +  -  -  -      -   -  -     -  -  -  +  -  -  -  -  -  -  -  -  -    39


     102  -----      --- +---------+- - --   -----+  - -  --  - --   - -  139
          AACCA      GCG TTTTATTTTTGG G GG   AGAGCG  G A  GC  G CG   A G
         uAACCAuuuuuuGCGuUUUUA   UUGGuGuGGuuuAGAGCGuuGuAuuGCuuGuCGuuuAuG
     181 ---------+---------+-   --------+---------+---------+---------+  240
          N  H  F  L  R  F  Y     W  C  G  L  E  R  C  I  A  C  R  L  C  
      40  +  -  -  -  -  -  -     -  -  -  +  -  -  -  -  -  -  -  -  -    59


     140  +-   --   ---- --+---   ----  --+ -------- -  +-- ----    -- -+ ----  184
          GA   AA   GCCC ATTTTG   AGCA  GGA GTTTTTCG G  GGG GGAG    GG GG CATT
         uGAuuuAAuuuGCCCuA    GuuuAGCAuuGGAuG   UUCGuGuuGGGuGGAGuuuuGGuGGuCA  
     241 ---------+-------    --+---------+--   -------+---------+---------+    300
          D  L  I  C  P  S      L  A  L  D  V     R  V  G  W  S  F  G  G  H    
      60  +  -  -  -  -  -      -  -  -  -  +     -  -  -  -  -  -  -  -  -      79


     185 ----    -+---  --   ---  -+-  --------+---  - -   -  - --     + -  221
         TCTG    GCGGA  GA   ACA  GAG  ATTCTTGTTTCG  G A   A  G GG     G A 
         UC GuuuuGCGGAuuGAuuuACAuuGAGuuA UC  G  UCGuuGuAuuuAuuGuGGuuuuuGuAu
     301 -- -------+---------+---------+ --  -  ------+---------+---------+  360
          R   F  A  D  W  F  T  L  S  Y   R      R  C  I  Y  C  G  F  C  M  
      80  +   -  -  -  -  -  -  -  -  -   +      -  -  -  -  -  -  -  -  -    99


     222 --- -   ----+---------+----  -----+---  -   -  - - -     -  +     260
         GCA G   GCCCGACAGATTTTTGCCA  ACGCATTCA  G   G  A G G     G  G   
         GCAuGuuuGCCCGACAGA    UGCCAuuACGCAUUCAuuGuuuGuuAuGuGuuuuuGuuGuuu
     361 ---------+--------    -+---------+---------+---------+---------+  420
          H  V  C  P  T  D      A  I  T  H  S  L  F  V  M  C  F  C  C  L  
     100  +  -  -  -  -  -      -  -  -  -  +  -  -  -  -  -  -  -  -  -   119


     261 ---------+- -   -  ------+---------+     -  -   --  -  -    - -  -   +-  301
         AGCCTTATTTG A   A  GTGCGCTTTCTTTCAAG     A  G   GG  G  G    A G  A   GA
         AGCC  A  UGuAuuuAuuG GCGC   C   CAAGuuuuuAuuGuuuGGuuGuuGuuuuAuGuuAuuuGA
     421 ----  -  ----+------ ---+   -   --------+---------+---------+---------+  480
          A    M    Y  L  L   A  P        K  F  L  L  F  G  C  C  F  M  L  F  D  
     120  +    -    -  -  -   -  -        -  -  -  +  -  -  -  -  -  -  -  -  -   139


     302      -   - -    - - --  -   +    --- --   -  ---   + --   -----  327
              A   G G    G G AG  A   A    GGG GA   A  GTG   A GA   AATTT
         uuuuuAuuuGuGuuuuGuGuAGuuAuuuAuuuuGGGuGAuuuAuuGUGuuuAuGAuuuAA   
     481 ---------+---------+---------+---------+---------+---------+     540
          F  Y  L  C  F  V  * 
     140  +  -  -  -  -  -     145


     328 --+----  -----+---------+---------+-  361
         AGAATTA  CACGGTGAAATTAAATTTTGACTAAAT
         AGAA  AuuCACGGUGAAAUUAAAUUUUGACUAAAU
     541 ----  -----+---------+---------+----  574