Gene: Cytochrome oxidase 2
Species: Trypanosoma cruzi
Notes:


       1 ---------+---------+---------+---------+---------+---------+  60
DNA      AAGATTTAAATTATGAGTTTTATTTTGTCATTTTGAATGATATTTTTAATAGATTCTGTT
RNA-ed   AAGAUUUAAAUUAUGAGUUUUAUUUUGUCAUUUUGAAUGAUAUUUUUAAUAGAUUCUGUU
       1 ---------+---------+---------+---------+---------+---------+  60
AA                   M  S  F  I  L  S  F  W  M  I  F  L  I  D  S  V    
                   1 -  -  -  -  -  -  -  -  -  +  -  -  -  -  -  -    16


      61 ---------+---------+---------+---------+---------+---------+ 120
         ATAGTGTTATTATCTTTTGTTTGTTTTGTGTGTGTGTGAATATGTGTGTTGCTCCTTTCT
         AUAGUGUUAUUAUCUUUUGUUUGUUUUGUGUGUGUGUGAAUAUGUGUGUUGCUCCUUUCU
      61 ---------+---------+---------+---------+---------+---------+ 120
         I  V  L  L  S  F  V  C  F  V  C  V  W  I  C  V  L  L  L  S    
      17 -  -  -  +  -  -  -  -  -  -  -  -  -  +  -  -  -  -  -  -    36


     121 ---------+---------+---------+---------+---------+---------+ 180
         ACAGTTTTATTTGTTACAAAGATAAATAATATATATTGTACATGAGACTTTGTATCATCA
         ACAGUUUUAUUUGUUACAAAGAUAAAUAAUAUAUAUUGUACAUGAGACUUUGUAUCAUCA
     121 ---------+---------+---------+---------+---------+---------+ 180
         T  V  L  F  V  T  K  I  N  N  I  Y  C  T  W  D  F  V  S  S    
      37 -  -  -  +  -  -  -  -  -  -  -  -  -  +  -  -  -  -  -  -    56


     181 ---------+---------+---------+---------+---------+---------+ 240
         AAGTTTGTGGATACTTATTGGTTTGTAATAGGAGTCATGTTTATTATGTGTTTACTATTA
         AAGUUUGUGGAUACUUAUUGGUUUGUAAUAGGAGUCAUGUUUAUUAUGUGUUUACUAUUA
     181 ---------+---------+---------+---------+---------+---------+ 240
         K  F  V  D  T  Y  W  F  V  I  G  V  M  F  I  M  C  L  L  L    
      57 -  -  -  +  -  -  -  -  -  -  -  -  -  +  -  -  -  -  -  -    76


     241 ---------+---------+---------+---------+---------+---------+ 300
         AGATTGTGTCTATTGTTATATTTTGGTTGTTTGAATTTTGTTAGTTTTGATTTATGTAAG
         AGAUUGUGUCUAUUGUUAUAUUUUGGUUGUUUGAAUUUUGUUAGUUUUGAUUUAUGUAAG
     241 ---------+---------+---------+---------+---------+---------+ 300
         R  L  C  L  L  L  Y  F  G  C  L  N  F  V  S  F  D  L  C  K    
      77 -  -  -  +  -  -  -  -  -  -  -  -  -  +  -  -  -  -  -  -    96


     301 ---------+---------+---------+---------+---------+---------+ 360
         GTAGTAGGTTTCCAATGATATTGAGTATATTTTTTATTTGGAGAGACTACAATATTTAGC
         GUAGUAGGUUUCCAAUGAUAUUGAGUAUAUUUUUUAUUUGGAGAGACUACAAUAUUUAGC
     301 ---------+---------+---------+---------+---------+---------+ 360
         V  V  G  F  Q  W  Y  W  V  Y  F  L  F  G  E  T  T  I  F  S   
      97 -  -  -  +  -  -  -  -  -  -  -  -  -  +  -  -  -  -  -  -   116


     361 ---------+---------+---------+---------+---------+---------+ 420
         AACTTAATACTTGAAAGTGATTACTTGGTGGGTGATATGCGTCTATTGCAGTGTAATCAT
         AACUUAAUACUUGAAAGUGAUUACUUGGUGGGUGAUAUGCGUCUAUUGCAGUGUAAUCAU
     361 ---------+---------+---------+---------+---------+---------+ 420
         N  L  I  L  E  S  D  Y  L  V  G  D  M  R  L  L  Q  C  N  H   
     117 -  -  -  +  -  -  -  -  -  -  -  -  -  +  -  -  -  -  -  -   136


     421 ---------+---------+---------+---------+---------+---------+ 480
         GTACTCACATTATTAAGTTTAGTAATTTATAAATTGTGAGTATCTGCTGTAGATGTTATC
         GUACUCACAUUAUUAAGUUUAGUAAUUUAUAAAUUGUGAGUAUCUGCUGUAGAUGUUAUC
     421 ---------+---------+---------+---------+---------+---------+ 480
         V  L  T  L  L  S  L  V  I  Y  K  L  W  V  S  A  V  D  V  I   
     137 -  -  -  +  -  -  -  -  -  -  -  -  -  +  -  -  -  -  -  -   156


     481 ---------+---------+---------+--------  - + ---------+------ 536
         CATTCATTTACGTTAGCTAGTTTAGGTATAAAGGTAGA  G A ACCGGGTAGGTGTAAT
         CAUUCAUUUACGUUAGCUAGUUUAGGUAUAAAGGUAGAuuGuAuACCGGGUAGGUGUAAU
     481 ---------+---------+---------+---------+---------+---------+ 540
         H  S  F  T  L  A  S  L  G  I  K  V  D  C  I  P  G  R  C  N   
     157 -  -  -  +  -  -  -  -  -  -  -  -  -  +  -  -  -  -  -  -   176


     537 ---+---------+---------+---------+---------+---------+------ 596
         GAAATCATTTTATTTGCATCTAATAATGCAACAATATATGGGCAATGCAGCGAGTTATGT
         GAAAUCAUUUUAUUUGCAUCUAAUAAUGCAACAAUAUAUGGGCAAUGCAGCGAGUUAUGU
     541 ---------+---------+---------+---------+---------+---------+ 600
         E  I  I  L  F  A  S  N  N  A  T  I  Y  G  Q  C  S  E  L  C   
     177 -  -  -  +  -  -  -  -  -  -  -  -  -  +  -  -  -  -  -  -   196


     597 ---+---------+---------+---------+---------+---------+------ 656
         GGGGTCTTACATGGATTTATGCCAATTGTTATATGTTTTATATAAAAGGTATATAATCTA
         GGGGUCUUACAUGGAUUUAUGCCAAUUGUUAUAUGUUUUAUAUAAAAGGUAUAUAAUCUA
     601 ---------+---------+---------+---------+---------+---------+ 660
         G  V  L  H  G  F  M  P  I  V  I  C  F  I  * 
     197 -  -  -  +  -  -  -  -  -  -  -  -  -  +     210


     657 ---+---------+---------+---------+------ 696
         CAGATATAATTAAAAAAAAAAAAAAAAAAAAAAAATATAT
         CAGAUAUAAUUAAAAAAAAAAAAAAAAAAAAAAAAUAUAU
     661 ---------+---------+---------+---------+ 700